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  5. GSVIVT01037036001

GSVIVT01037036001


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase


Gene families : OG0004387 (Archaeplastida) Phylogenetic Tree(s): OG0004387_tree ,
OG_05_0005327 (LandPlants) Phylogenetic Tree(s): OG_05_0005327_tree ,
OG_06_0005490 (SeedPlants) Phylogenetic Tree(s): OG_06_0005490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037036001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00135980 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Gb_20440 No alias aspartate-tRNA ligase 0.04 Archaeplastida
MA_10428733g0010 No alias Aspartate--tRNA ligase, chloroplastic/mitochondrial... 0.03 Archaeplastida
MA_9216541g0010 No alias aspartate-tRNA ligase 0.05 Archaeplastida
Pp3c20_5000V3.1 No alias tRNA synthetase class II (D, K and N) family protein 0.04 Archaeplastida
Solyc01g106740.4.1 No alias aspartate-tRNA ligase 0.04 Archaeplastida
Zm00001e016877_P001 No alias aspartate-tRNA ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 192 631
IPR004365 NA-bd_OB_tRNA 84 168
IPR029351 GAD_dom 383 482
No external refs found!