1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01037259001

GSVIVT01037259001


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000543 (Archaeplastida) Phylogenetic Tree(s): OG0000543_tree ,
OG_05_0000407 (LandPlants) Phylogenetic Tree(s): OG_05_0000407_tree ,
OG_06_0000284 (SeedPlants) Phylogenetic Tree(s): OG_06_0000284_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037259001
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00031410 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
AT1G65920 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Archaeplastida
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Archaeplastida
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Gb_31523 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
LOC_Os05g01610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
MA_10435870g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_136157g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Smo180358 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Solyc04g071040.4.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.06 Archaeplastida
Zm00001e007456_P003 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Zm00001e032303_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR001849 PH_domain 16 122
IPR027988 BRX_N 763 797
IPR013591 Brevis_radix_dom 880 934
IPR000408 Reg_chr_condens 347 396
IPR000408 Reg_chr_condens 399 448
IPR000408 Reg_chr_condens 453 500
IPR000408 Reg_chr_condens 263 311
IPR000306 Znf_FYVE 504 570
No external refs found!