GSVIVT01037358001

Description : Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana

Gene families : OG0005299 (Archaeplastida) Phylogenetic Tree(s): OG0005299_tree ,
OG_05_0005007 (LandPlants) Phylogenetic Tree(s): OG_05_0005007_tree ,
OG_06_0004945 (SeedPlants) Phylogenetic Tree(s): OG_06_0004945_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01037358001
Cluster	HCCA: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00101p00142180	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AT2G26780	No alias	ARM repeat superfamily protein	0.08	Archaeplastida
Cpa\|evm.model.tig00021073.37	No alias	No description available	0.03	Archaeplastida
Gb_39352	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os11g04220.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10435733g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_92154g0010	No alias	no hits & (original description: none)	0.1	Archaeplastida
Smo118632	No alias	No description available	0.02	Archaeplastida
Zm00001e024073_P003	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0032947	protein-containing complex scaffold activity	IEA	Interproscan
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043248	proteasome assembly	IEA	Interproscan
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Neighborhood
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
CC	GO:0009341	beta-galactosidase complex	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024372	Ecm29	112	593
IPR026960	RVT-Znf	1102	1191

External Links

No external refs found!