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  5. GSVIVT01037436001

GSVIVT01037436001


Description : F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana


Gene families : OG0006532 (Archaeplastida) Phylogenetic Tree(s): OG0006532_tree ,
OG_05_0006166 (LandPlants) Phylogenetic Tree(s): OG_05_0006166_tree ,
OG_06_0006629 (SeedPlants) Phylogenetic Tree(s): OG_06_0006629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037436001
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00137710 evm_27.TU.AmTr_v1... F-box/WD-40 repeat-containing protein At5g21040... 0.03 Archaeplastida
Mp6g08920.1 No alias F-box/WD-40 repeat-containing protein At5g21040... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 512 764
IPR001810 F-box_dom 126 169
IPR001680 WD40_repeat 210 243
IPR001680 WD40_repeat 308 336
No external refs found!