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  5. GSVIVT01037543001

GSVIVT01037543001


Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 215.0) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia


Gene families : OG0000439 (Archaeplastida) Phylogenetic Tree(s): OG0000439_tree ,
OG_05_0000476 (LandPlants) Phylogenetic Tree(s): OG_05_0000476_tree ,
OG_06_0000400 (SeedPlants) Phylogenetic Tree(s): OG_06_0000400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037543001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
GSVIVT01012185001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.06 Archaeplastida
GSVIVT01023452001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.07 Archaeplastida
GSVIVT01023455001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 Archaeplastida
GSVIVT01024793001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.06 Archaeplastida
LOC_Os02g03870.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
LOC_Os03g53860.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 Archaeplastida
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
Pp3c6_240V3.1 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
Zm00001e012037_P001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 Archaeplastida
Zm00001e025311_P002 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 3 280
IPR002772 Glyco_hydro_3_C 317 526
No external refs found!