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  5. GSVIVT01037572001

GSVIVT01037572001


Description : Transcription factor LHW OS=Arabidopsis thaliana


Gene families : OG0001327 (Archaeplastida) Phylogenetic Tree(s): OG0001327_tree ,
OG_05_0000903 (LandPlants) Phylogenetic Tree(s): OG_05_0000903_tree ,
OG_06_0001711 (SeedPlants) Phylogenetic Tree(s): OG_06_0001711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037572001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00176130 evm_27.TU.AmTr_v1... Transcription factor LHW OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00069p00042170 evm_27.TU.AmTr_v1... Transcription factor LHW OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G06150 EMB1444 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Gb_14057 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g06010.1 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g06335.1 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436087g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_18030g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Mp7g02370.1 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc09g011170.3.1 No alias Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc09g066280.4.1 No alias Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g068960.2.1 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e009089_P003 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e015411_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e024625_P002 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e032637_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e039416_P001 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e041446_P005 No alias Transcription factor LHW OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 5 181
No external refs found!