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  5. GSVIVT01037590001

GSVIVT01037590001


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SPF31 pre-mRNA splicing factor


Gene families : OG0005508 (Archaeplastida) Phylogenetic Tree(s): OG0005508_tree ,
OG_05_0004857 (LandPlants) Phylogenetic Tree(s): OG_05_0004857_tree ,
OG_06_0005323 (SeedPlants) Phylogenetic Tree(s): OG_06_0005323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037590001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Mp7g14760.1 No alias pre-mRNA splicing factor (SPF31) 0.03 Archaeplastida
Solyc11g071930.2.1 No alias pre-mRNA splicing factor (SPF31) 0.05 Archaeplastida
Zm00001e001123_P001 No alias pre-mRNA splicing factor (SPF31) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 39 96
No external refs found!