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  5. GSVIVT01037750001

GSVIVT01037750001


Description : Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor


Gene families : OG0001003 (Archaeplastida) Phylogenetic Tree(s): OG0001003_tree ,
OG_05_0001487 (LandPlants) Phylogenetic Tree(s): OG_05_0001487_tree ,
OG_06_0001278 (SeedPlants) Phylogenetic Tree(s): OG_06_0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037750001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT5G48460 No alias Actin binding Calponin homology (CH) domain-containing protein 0.04 Archaeplastida
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
LOC_Os02g37580.1 No alias fimbrin actin-crosslinking factor 0.03 Archaeplastida
Mp1g27470.1 No alias fimbrin actin-crosslinking factor 0.05 Archaeplastida
Solyc07g049600.4.1 No alias fimbrin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e014968_P001 No alias fimbrin actin-crosslinking factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001715 CH-domain 516 617
IPR001715 CH-domain 394 497
IPR001715 CH-domain 145 236
IPR001715 CH-domain 268 368
No external refs found!