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  5. GSVIVT01037751001

GSVIVT01037751001


No description available


Gene families : OG0000513 (Archaeplastida) Phylogenetic Tree(s): OG0000513_tree ,
OG_05_0001784 (LandPlants) Phylogenetic Tree(s): OG_05_0001784_tree ,
OG_06_0001864 (SeedPlants) Phylogenetic Tree(s): OG_06_0001864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037751001
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT1G31760 No alias SWIB/MDM2 domain superfamily protein 0.03 Archaeplastida
AT3G03590 No alias SWIB/MDM2 domain superfamily protein 0.04 Archaeplastida
AT4G22360 No alias SWIB complex BAF60b domain-containing protein 0.03 Archaeplastida
LOC_Os03g55310.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g39310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_17694g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 255 325
IPR003121 SWIB_MDM2_domain 151 221
IPR014876 DEK_C 2 56
No external refs found!