1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01037819001

GSVIVT01037819001


Description : RNA biosynthesis.transcriptional activation.LIM transcription factor


Gene families : OG0000926 (Archaeplastida) Phylogenetic Tree(s): OG0000926_tree ,
OG_05_0000998 (LandPlants) Phylogenetic Tree(s): OG_05_0000998_tree ,
OG_06_0003820 (SeedPlants) Phylogenetic Tree(s): OG_06_0003820_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037819001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g42820.1 No alias transcription factor (LIM) 0.02 Archaeplastida
LOC_Os06g13030.1 No alias transcription factor (LIM) 0.07 Archaeplastida
LOC_Os10g35930.1 No alias transcription factor (LIM) 0.04 Archaeplastida
LOC_Os12g32620.1 No alias transcription factor (LIM) 0.02 Archaeplastida
MA_20195g0010 No alias transcription factor (LIM) 0.02 Archaeplastida
Zm00001e007423_P001 No alias transcription factor (LIM) 0.02 Archaeplastida
Zm00001e015234_P001 No alias transcription factor (LIM) 0.03 Archaeplastida
Zm00001e023098_P001 No alias transcription factor (LIM) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 111 166
No external refs found!