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  5. GSVIVT01038117001

GSVIVT01038117001


Description : Endochitinase EP3 OS=Arabidopsis thaliana


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0000276 (SeedPlants) Phylogenetic Tree(s): OG_06_0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038117001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g18400.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g41620.1 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_224992g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.01 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 261 306
IPR000726 Glyco_hydro_19_cat 109 253
IPR001002 Chitin-bd_1 61 92
No external refs found!