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  5. GSVIVT01038234001

GSVIVT01038234001


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0002452 (LandPlants) Phylogenetic Tree(s): OG_05_0002452_tree ,
OG_06_0002735 (SeedPlants) Phylogenetic Tree(s): OG_06_0002735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038234001
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT3G10190 No alias Calcium-binding EF-hand family protein 0.05 Archaeplastida
MA_18615g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8749g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 23 85
IPR002048 EF_hand_dom 95 159
No external refs found!