1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01038535001

GSVIVT01038535001


Description : Vesicle trafficking.target membrane tethering.Exocyst complex.SEC6 component


Gene families : OG0003833 (Archaeplastida) Phylogenetic Tree(s): OG0003833_tree ,
OG_05_0006001 (LandPlants) Phylogenetic Tree(s): OG_05_0006001_tree ,
OG_06_0006015 (SeedPlants) Phylogenetic Tree(s): OG_06_0006015_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038535001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre17.g744847 No alias Vesicle trafficking.target membrane tethering.Exocyst... 0.02 Archaeplastida
Mp1g20220.1 No alias component SEC6 of Exocyst complex 0.03 Archaeplastida
Pp3c8_3920V3.1 No alias SEC6 0.02 Archaeplastida
Smo269181 No alias Vesicle trafficking.target membrane tethering.Exocyst... 0.03 Archaeplastida
Solyc04g072290.3.1 No alias component SEC6 of Exocyst complex 0.02 Archaeplastida
Zm00001e015853_P004 No alias component SEC6 of Exocyst complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0070531 BRCA1-A complex IEP Neighborhood
CC GO:0070552 BRISC complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010326 EXOC3/Sec6 176 736
No external refs found!