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  5. AMTR_s00046p00173420

AMTR_s00046p00173420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.96

Description : Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase


Gene families : OG0000203 (Archaeplastida) Phylogenetic Tree(s): OG0000203_tree ,
OG_05_0000260 (LandPlants) Phylogenetic Tree(s): OG_05_0000260_tree ,
OG_06_0000505 (SeedPlants) Phylogenetic Tree(s): OG_06_0000505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00173420

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012805001 No alias Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01012807001 No alias Cell... 0.01 Archaeplastida
GSVIVT01012820001 No alias Cell... 0.02 Archaeplastida
GSVIVT01035880001 No alias Cell... 0.01 Archaeplastida
LOC_Os04g01930.1 No alias xylogalacturonan xylosyltransferase 0.05 Archaeplastida
Pp3c22_20140V3.1 No alias Exostosin family protein 0.02 Archaeplastida
Pp3c22_20240V3.1 No alias Exostosin family protein 0.06 Archaeplastida
Smo136816 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo229884 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc09g008720.3.1 No alias xylogalacturonan xylosyltransferase 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004263 Exostosin 3 282
No external refs found!