GSVIVT01038575001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin


Gene families : OG0001870 (Archaeplastida) Phylogenetic Tree(s): OG0001870_tree ,
OG_05_0001719 (LandPlants) Phylogenetic Tree(s): OG_05_0001719_tree ,
OG_06_0001725 (SeedPlants) Phylogenetic Tree(s): OG_06_0001725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038575001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00188470 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
AT5G53480 No alias ARM repeat superfamily protein 0.1 Archaeplastida
Cpa|evm.model.tig00021348.90 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Gb_35028 No alias IMB1 nucleocytoplasmic import karyopherin 0.07 Archaeplastida
LOC_Os12g38110.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.04 Archaeplastida
MA_10432604g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g11310.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.05 Archaeplastida
Pp3c11_26710V3.1 No alias ARM repeat superfamily protein 0.04 Archaeplastida
Pp3c7_5160V3.1 No alias ARM repeat superfamily protein 0.03 Archaeplastida
Smo158150 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Smo185511 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc03g082940.3.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.1 Archaeplastida
Solyc06g052030.3.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.07 Archaeplastida
Zm00001e002934_P001 No alias IMB1 nucleocytoplasmic import karyopherin 0.06 Archaeplastida
Zm00001e018172_P001 No alias IMB1 nucleocytoplasmic import karyopherin 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0008536 Ran GTPase binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 102 181
No external refs found!