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  5. AMTR_s00046p00176040

AMTR_s00046p00176040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.99

No description available


Gene families : OG0000302 (Archaeplastida) Phylogenetic Tree(s): OG0000302_tree ,
OG_05_0020486 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019686 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00176040
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Gb_34648 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.02 Archaeplastida
LOC_Os06g48630.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 Archaeplastida
Pp3c21_20120V3.1 No alias ENTH/ANTH/VHS superfamily protein 0.03 Archaeplastida
Smo437722 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Zm00001e030401_P001 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.02 Archaeplastida
Zm00001e031059_P001 No alias Putative clathrin assembly protein At5g35200... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011417 ANTH_dom 19 106
No external refs found!