Description : DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana

Gene families : OG0002173 (Archaeplastida) Phylogenetic Tree(s): OG0002173_tree ,
OG_05_0008521 (LandPlants) Phylogenetic Tree(s): OG_05_0008521_tree ,
OG_06_0009565 (SeedPlants) Phylogenetic Tree(s): OG_06_0009565_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: GSVIVT01038675001
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.149 No alias No description available 0.02 Archaeplastida
Mp2g00480.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_13780V3.1 No alias DNA mismatch repair protein MutS, type 2 0.03 Archaeplastida
Smo141299 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g080010.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 440 621
No external refs found!