GSVIVT01038734001

Description : Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana

Gene families : OG0001859 (Archaeplastida) Phylogenetic Tree(s): OG0001859_tree ,
OG_05_0001512 (LandPlants) Phylogenetic Tree(s): OG_05_0001512_tree ,
OG_06_0001418 (SeedPlants) Phylogenetic Tree(s): OG_06_0001418_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01038734001
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AT5G64200	SC35, ATSC35, At-SC35	ortholog of human splicing factor SC35	0.03	Archaeplastida
Mp3g22400.1	No alias	Serine/arginine-rich splicing factor SC35 OS=Arabidopsis...	0.02	Archaeplastida
Pp3c1_31300V3.1	No alias	ortholog of human splicing factor SC35	0.03	Archaeplastida
Zm00001e024321_P003	No alias	Serine/arginine-rich splicing factor SC35 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	18	88

External Links

No external refs found!