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  5. AMTR_s00046p00191970

AMTR_s00046p00191970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.116

No description available


Gene families : OG0000794 (Archaeplastida) Phylogenetic Tree(s): OG0000794_tree ,
OG_05_0000615 (LandPlants) Phylogenetic Tree(s): OG_05_0000615_tree ,
OG_06_0000503 (SeedPlants) Phylogenetic Tree(s): OG_06_0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00191970
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.03 Archaeplastida
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.03 Archaeplastida
GSVIVT01006298001 No alias No description available 0.03 Archaeplastida
GSVIVT01006302001 No alias No description available 0.05 Archaeplastida
GSVIVT01012710001 No alias No description available 0.06 Archaeplastida
Gb_00786 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_00787 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g44020.2 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g03790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g13580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g03130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c4_23770V3.1 No alias Rhamnogalacturonate lyase family protein 0.02 Archaeplastida
Smo413798 No alias No description available 0.03 Archaeplastida
Solyc04g076640.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g011290.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g011300.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e013992_P006 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 12 60
No external refs found!