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Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.118
No description available
Gene families : OG0000794 (Archaeplastida) Phylogenetic Tree(s): OG0000794_tree ,
OG_05_0000615 (LandPlants) Phylogenetic Tree(s): OG_05_0000615_tree ,
OG_06_0000503 (SeedPlants) Phylogenetic Tree(s): OG_06_0000503_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00046p00196000 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G24430 | No alias | Rhamnogalacturonate lyase family protein | 0.03 | Archaeplastida | |
| LOC_Os08g44040.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0006784 | heme a biosynthetic process | IEP | Neighborhood |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009894 | regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009896 | positive regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0010506 | regulation of autophagy | IEP | Neighborhood |
| BP | GO:0010508 | positive regulation of autophagy | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0031331 | positive regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046160 | heme a metabolic process | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010325 | Rhamnogal_lyase | 2 | 48 |
| No external refs found! |