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  5. Cre01.g025950

Cre01.g025950


Description : Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g025950
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031849001 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.01 Archaeplastida
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
GSVIVT01035759001 No alias Pentatricopeptide repeat-containing protein At2g20540... 0.01 Archaeplastida
MA_159535g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.01 Archaeplastida
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.01 Archaeplastida
Smo150748 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 Archaeplastida
Zm00001e012838_P001 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.02 Archaeplastida
Zm00001e019482_P001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.01 Archaeplastida
Zm00001e040418_P001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 604 630
IPR002885 Pentatricopeptide_repeat 494 538
No external refs found!