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  5. Cre01.g026300

Cre01.g026300


Description : ERAD-associated E3 ubiquitin-protein ligase component HRD3A OS=Arabidopsis thaliana


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g026300
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00058990 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
MA_10427530g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_37951V3.1 No alias No annotation 0.01 Archaeplastida
Solyc11g044943.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006597 Sel1-like 903 938
IPR006597 Sel1-like 1367 1381
IPR006597 Sel1-like 867 901
IPR006597 Sel1-like 1067 1081
IPR006597 Sel1-like 977 1003
IPR006597 Sel1-like 831 866
IPR006597 Sel1-like 1382 1411
IPR006597 Sel1-like 939 974
No external refs found!