Cre01.g038151

Description : ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana

Gene families : OG0001589 (Archaeplastida) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g038151
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT1G05910	No alias	cell division cycle protein 48-related / CDC48-related	0.02	Archaeplastida
AT3G15120	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	Archaeplastida
Cpa\|evm.model.tig00001042.14	No alias	ATPase family AAA domain-containing protein At1g05910...	0.02	Archaeplastida
GSVIVT01014274001	No alias	DNA damage response.BRCA1â€“BARD1 DNA-damage response...	0.01	Archaeplastida
Gb_11471	No alias	component BRCA1\|BARD1 of BRCA1â€“BARD1 DNA-damage...	0.03	Archaeplastida
LOC_Os01g47800.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os09g33980.1	No alias	ATPase family AAA domain-containing protein At1g05910...	0.04	Archaeplastida
MA_10425878g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10425878g0020	No alias	ATPase family AAA domain-containing protein At1g05910...	0.01	Archaeplastida
Mp2g00420.1	No alias	ATPase family AAA domain-containing protein At1g05910...	0.02	Archaeplastida
Pp3c20_16710V3.1	No alias	cell division cycle protein 48-related / CDC48-related	0.01	Archaeplastida
Pp3c8_5410V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Solyc04g076180.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e020208_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e034695_P003	No alias	ATPase family AAA domain-containing protein At1g05910...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000726	non-recombinational repair	IEP	Neighborhood
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004003	ATP-dependent DNA helicase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006298	mismatch repair	IEP	Neighborhood
BP	GO:0006302	double-strand break repair	IEP	Neighborhood
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
MF	GO:0043015	gamma-tubulin binding	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001487	Bromodomain	1281	1353
IPR003959	ATPase_AAA_core	685	820

External Links

No external refs found!

Cre01.g038151

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation