AMTR_s00047p00130260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.53

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TATA box-binding protein (TBP) component


Gene families : OG0001939 (Archaeplastida) Phylogenetic Tree(s): OG0001939_tree ,
OG_05_0002908 (LandPlants) Phylogenetic Tree(s): OG_05_0002908_tree ,
OG_06_0002748 (SeedPlants) Phylogenetic Tree(s): OG_06_0002748_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00130260
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046937 phytochelatin metabolic process IEP Neighborhood
BP GO:0046938 phytochelatin biosynthetic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000814 TBP 23 86
No external refs found!