1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00047p00138180

AMTR_s00047p00138180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.58

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000726 (LandPlants) Phylogenetic Tree(s): OG_05_0000726_tree ,
OG_06_0012101 (SeedPlants) Phylogenetic Tree(s): OG_06_0012101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00138180
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273020 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00060p00215110 evm_27.TU.AmTr_v1... No description available 0.09 Archaeplastida
AMTR_s00085p00124710 evm_27.TU.AmTr_v1... Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR000157 TIR_dom 5 110
No external refs found!