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  5. Cre02.g079300

Cre02.g079300


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.VPS4-VTA1 ESCRT-disassembly complex.VPS4/SKD1 ATPase component


Gene families : OG0002917 (Archaeplastida) Phylogenetic Tree(s): OG0002917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g079300
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00030500 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
AT2G27600 VPS4, SKD1, ATSKD1 AAA-type ATPase family protein 0.02 Archaeplastida
Cpa|evm.model.tig00001126.11 No alias Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.06 Archaeplastida
GSVIVT01011251001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 Archaeplastida
GSVIVT01036166001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
LOC_Os01g04814.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Archaeplastida
Mp8g01610.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Archaeplastida
Pp3c2_35940V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Solyc11g007170.2.1 No alias serine carboxypeptidase. ATPase component VPS4/SKD1 of... 0.02 Archaeplastida
Solyc11g067240.2.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Archaeplastida
Zm00001e016954_P004 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.04 Archaeplastida
Zm00001e025779_P001 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015415 Vps4_C 368 432
IPR003959 ATPase_AAA_core 165 294
IPR007330 MIT 9 72
No external refs found!