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  5. Cre02.g079400

Cre02.g079400


No description available


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g079400
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00256900 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
AMTR_s00030p00198740 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00043p00170970 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
AT3G46020 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Archaeplastida
AT4G39260 CCR1, GR-RBP8,... cold, circadian rhythm, and RNA binding 1 0.03 Archaeplastida
GSVIVT01036082001 No alias Small RNA-binding protein 11, chloroplastic... 0.03 Archaeplastida
Gb_37118 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Mp3g24820.1 No alias RNA-binding protein CP31B, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Mp6g08160.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Solyc05g053780.4.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 Archaeplastida
Solyc10g081180.2.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 Archaeplastida
Solyc10g083240.2.1 No alias Small RNA-binding protein 11, chloroplastic... 0.02 Archaeplastida
Zm00001e012278_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e040294_P001 No alias RNA editing factor (ORRM) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 50 118
No external refs found!