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  5. Cre02.g079700

Cre02.g079700


Description : Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.aspartate transcarbamoylase


Gene families : OG0005859 (Archaeplastida) Phylogenetic Tree(s): OG0005859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g079700
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT3G20330 PYRB PYRIMIDINE B 0.02 Archaeplastida
LOC_Os08g15030.1 No alias aspartate transcarbamoylase 0.04 Archaeplastida
Smo235243 No alias Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 Archaeplastida
Solyc11g006350.1.1 No alias aspartate transcarbamoylase 0.02 Archaeplastida
Zm00001e022282_P001 No alias aspartate transcarbamoylase 0.03 Archaeplastida
Zm00001e039923_P001 No alias aspartate transcarbamoylase 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 210 359
IPR006132 Asp/Orn_carbamoyltranf_P-bd 60 202
No external refs found!