AT1G50180


Description : NB-ARC domain-containing disease resistance protein


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50180
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00145890 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00061p00145930 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
AMTR_s00061p00163970 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00061p00165330 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00085p00102880 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00088p00057720 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00090p00137350 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00148p00037160 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00190p00027950 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s02154p00002280 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.11 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.07 Archaeplastida
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.09 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.08 Archaeplastida
AT3G46730 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.17 Archaeplastida
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01007238001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01024099001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01026740001 No alias Putative disease resistance protein At1g50180... 0.05 Archaeplastida
GSVIVT01026742001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01026750001 No alias Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
Gb_10846 No alias Probable disease resistance protein At1g61180... 0.07 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.02 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.05 Archaeplastida
Gb_37038 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_40740 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.05 Archaeplastida
LOC_Os04g14220.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g16070.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g11950.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g11960.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g11990.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os11g12000.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g12040.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12050.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12300.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g12320.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os11g12340.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g12350.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10297274g0010 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 Archaeplastida
MA_10429865g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_193082g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_215317g0010 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_828327g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004008 copper-exporting ATPase activity IEP Neighborhood
MF GO:0004516 nicotinate phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
MF GO:0005388 calcium-transporting ATPase activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006878 cellular copper ion homeostasis IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
MF GO:0015085 calcium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015086 cadmium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015434 cadmium-transporting ATPase activity IEP Neighborhood
MF GO:0015633 zinc-transporting ATPase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019357 nicotinate nucleotide biosynthetic process IEP Neighborhood
BP GO:0019358 nicotinate nucleotide salvage IEP Neighborhood
BP GO:0019365 pyridine nucleotide salvage IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019904 protein domain specific binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030275 LRR domain binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043173 nucleotide salvage IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
MF GO:0043682 copper-transporting ATPase activity IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0046497 nicotinate nucleotide metabolic process IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055069 zinc ion homeostasis IEP Neighborhood
BP GO:0055070 copper ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 168 419
No external refs found!