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  5. Cre02.g101400

Cre02.g101400


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain


Gene families : OG0002049 (Archaeplastida) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g101400
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00168430 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
AT3G11130 No alias Clathrin, heavy chain 0.02 Archaeplastida
GSVIVT01032792001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Gb_33029 No alias Clathrin heavy chain 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os11g01380.1 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
LOC_Os12g01390.1 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Pp3c1_37710V3.1 No alias Clathrin, heavy chain 0.02 Archaeplastida
Pp3c2_3220V3.1 No alias Clathrin, heavy chain 0.02 Archaeplastida
Smo149750 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Solyc05g052510.4.1 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Zm00001e009296_P003 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Zm00001e020822_P001 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Zm00001e023940_P002 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida
Zm00001e039167_P001 No alias heavy chain of clathrin triskelion 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015348 Clathrin_H-chain_linker_core 341 364
IPR000547 Clathrin_H-chain/VPS_repeat 847 977
IPR000547 Clathrin_H-chain/VPS_repeat 698 834
IPR000547 Clathrin_H-chain/VPS_repeat 990 1130
IPR000547 Clathrin_H-chain/VPS_repeat 1437 1576
IPR000547 Clathrin_H-chain/VPS_repeat 1143 1278
IPR000547 Clathrin_H-chain/VPS_repeat 1288 1429
IPR000547 Clathrin_H-chain/VPS_repeat 553 689
IPR022365 Clathrin_H-chain_propeller_rpt 152 193
No external refs found!