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  5. AMTR_s00047p00209120

AMTR_s00047p00209120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.149

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-L-arabinose mutase


Gene families : OG0001314 (Archaeplastida) Phylogenetic Tree(s): OG0001314_tree ,
OG_05_0000942 (LandPlants) Phylogenetic Tree(s): OG_05_0000942_tree ,
OG_06_0001571 (SeedPlants) Phylogenetic Tree(s): OG_06_0001571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00209120
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.06 Archaeplastida
LOC_Os03g40270.1 No alias UDP-L-arabinose mutase 0.03 Archaeplastida
LOC_Os04g56520.2 No alias UDP-L-arabinose mutase 0.07 Archaeplastida
Pp3c15_23740V3.1 No alias reversibly glycosylated polypeptide 2 0.05 Archaeplastida
Pp3c15_23760V3.1 No alias reversibly glycosylated polypeptide 2 0.04 Archaeplastida
Pp3c15_23780V3.1 No alias reversibly glycosylated polypeptide 2 0.06 Archaeplastida
Pp3c9_24510V3.1 No alias reversibly glycosylated polypeptide 2 0.02 Archaeplastida
Smo140071 No alias Carbohydrate metabolism.nucleotide sugar... 0.02 Archaeplastida
Solyc04g005340.2.1 No alias UDP-L-arabinose mutase 0.04 Archaeplastida
Zm00001e012459_P003 No alias UDP-L-arabinose mutase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016866 intramolecular transferase activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004901 RGP 7 346
No external refs found!