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Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.162
Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.COB-type protein
Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0000657 (SeedPlants) Phylogenetic Tree(s): OG_06_0000657_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00047p00216570 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.09 | Archaeplastida | |
| AT5G60920 | COB | COBRA-like extracellular glycosyl-phosphatidyl... | 0.07 | Archaeplastida | |
| GSVIVT01008128001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | Archaeplastida | |
| GSVIVT01008129001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.1 | Archaeplastida | |
| GSVIVT01036565001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.1 | Archaeplastida | |
| Gb_25603 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| Gb_36719 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | Archaeplastida | |
| Gb_36720 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| LOC_Os03g30250.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.11 | Archaeplastida | |
| LOC_Os03g54750.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.07 | Archaeplastida | |
| LOC_Os05g32110.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | Archaeplastida | |
| LOC_Os07g41320.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.12 | Archaeplastida | |
| LOC_Os10g35460.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| MA_106654g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | Archaeplastida | |
| MA_4056g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | Archaeplastida | |
| MA_40967g0020 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| MA_637485g0010 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | Archaeplastida | |
| Mp7g06600.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
| Pp3c20_16270V3.1 | No alias | COBRA-like extracellular glycosyl-phosphatidyl... | 0.04 | Archaeplastida | |
| Pp3c2_9820V3.1 | No alias | COBRA-like protein 1 precursor | 0.02 | Archaeplastida | |
| Smo271954 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.06 | Archaeplastida | |
| Solyc01g103860.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| Solyc01g103877.1.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| Solyc01g111050.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
| Solyc02g065765.1.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| Solyc02g089130.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.13 | Archaeplastida | |
| Solyc03g070440.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.11 | Archaeplastida | |
| Solyc03g114900.3.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.12 | Archaeplastida | |
| Solyc03g114910.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | Archaeplastida | |
| Zm00001e005710_P002 | No alias | No annotation | 0.03 | Archaeplastida | |
| Zm00001e012022_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | Archaeplastida | |
| Zm00001e035505_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.07 | Archaeplastida | |
| Zm00001e038043_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.1 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 49 | 211 |
| No external refs found! |