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  5. AMTR_s00048p00028800

AMTR_s00048p00028800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.5

Description : Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana


Gene families : OG0000354 (Archaeplastida) Phylogenetic Tree(s): OG0000354_tree ,
OG_05_0000233 (LandPlants) Phylogenetic Tree(s): OG_05_0000233_tree ,
OG_06_0001818 (SeedPlants) Phylogenetic Tree(s): OG_06_0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00028800
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Archaeplastida
Gb_20174 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 Archaeplastida
LOC_Os11g34020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430369g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo103907 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.01 Archaeplastida
Zm00001e033245_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!