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  5. AMTR_s00048p00106110

AMTR_s00048p00106110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.52

No description available


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0000197 (LandPlants) Phylogenetic Tree(s): OG_05_0000197_tree ,
OG_06_0000631 (SeedPlants) Phylogenetic Tree(s): OG_06_0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00106110
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT5G18750 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Archaeplastida
GSVIVT01008568001 No alias No description available 0.03 Archaeplastida
GSVIVT01017824001 No alias No description available 0.03 Archaeplastida
GSVIVT01030061001 No alias No description available 0.03 Archaeplastida
LOC_Os06g34440.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_9830V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
Zm00001e017660_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0047800 cysteamine dioxygenase activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR024593 DUF3444 77 286
No external refs found!