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  5. Cre03.g163300

Cre03.g163300


Description : Cell cycle.interphase.DNA replication.preinitiation.CDT1 helicase auxiliary factor


Gene families : OG0002838 (Archaeplastida) Phylogenetic Tree(s): OG0002838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g163300
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00169560 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.03 Archaeplastida
AMTR_s00171p00068790 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.08 Archaeplastida
AT2G31270 CDT1, ATCDT1A, CDT1A homolog of yeast CDT1 A 0.04 Archaeplastida
AT3G54710 CDT1B, CDT1, ATCDT1B homolog of yeast CDT1 B homolog of yeast CDT1 B 0.02 Archaeplastida
GSVIVT01024251001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.04 Archaeplastida
GSVIVT01028303001 No alias Cell cycle.interphase.DNA replication.preinitiation.CDT1... 0.01 Archaeplastida
Gb_04601 No alias helicase auxiliary factor (CDT1) 0.01 Archaeplastida
Gb_39165 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
LOC_Os04g10650.1 No alias helicase auxiliary factor (CDT1) 0.04 Archaeplastida
LOC_Os10g34820.2 No alias helicase auxiliary factor (CDT1) 0.07 Archaeplastida
MA_114779g0010 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
MA_9011g0010 No alias helicase auxiliary factor (CDT1) 0.05 Archaeplastida
Pp3c18_4420V3.1 No alias homolog of yeast CDT1 B homolog of yeast CDT1 B 0.02 Archaeplastida
Pp3c19_14181V3.1 No alias homolog of yeast CDT1 B homolog of yeast CDT1 B 0.02 Archaeplastida
Solyc03g019960.3.1 No alias helicase auxiliary factor (CDT1) 0.08 Archaeplastida
Solyc06g008510.3.1 No alias helicase auxiliary factor (CDT1) 0.03 Archaeplastida
Zm00001e004505_P001 No alias helicase auxiliary factor (CDT1) 0.02 Archaeplastida
Zm00001e006735_P001 No alias helicase auxiliary factor (CDT1) 0.01 Archaeplastida
Zm00001e036500_P001 No alias helicase auxiliary factor (CDT1) 0.01 Archaeplastida
Zm00001e041798_P001 No alias helicase auxiliary factor (CDT1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048478 replication fork protection IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014939 CDT1_Gemini-bd-like 84 146
IPR032054 Cdt1_C 537 628
No external refs found!