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  5. AMTR_s00048p00143150

AMTR_s00048p00143150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.91

Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001075 (LandPlants) Phylogenetic Tree(s): OG_05_0001075_tree ,
OG_06_0000936 (SeedPlants) Phylogenetic Tree(s): OG_06_0000936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00143150
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.06 Archaeplastida
GSVIVT01021562001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
LOC_Os01g72210.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida
MA_125601g0010 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Mp5g05890.1 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
Pp3c1_33380V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.06 Archaeplastida
Solyc08g076310.3.1 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 322 645
No external refs found!