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  5. Cre03.g179961

Cre03.g179961


Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase epsilon complex.POL2/POLE1 catalytic component


Gene families : OG0003279 (Archaeplastida) Phylogenetic Tree(s): OG0003279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g179961
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 Archaeplastida
AMTR_s00040p00177210 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 Archaeplastida
Cpa|evm.model.tig00000970.30 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 Archaeplastida
Cpa|evm.model.tig00000970.31 No alias DNA polymerase epsilon catalytic subunit A... 0.05 Archaeplastida
GSVIVT01031365001 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 Archaeplastida
Gb_06608 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.03 Archaeplastida
LOC_Os02g30800.1 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.11 Archaeplastida
MA_10433902g0010 No alias DNA polymerase epsilon catalytic subunit A... 0.07 Archaeplastida
MA_80165g0010 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.08 Archaeplastida
MA_88369g0010 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.07 Archaeplastida
Mp3g08150.1 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.07 Archaeplastida
Pp3c13_4500V3.1 No alias DNA polymerase epsilon catalytic subunit 0.02 Archaeplastida
Smo442263 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 Archaeplastida
Solyc11g067110.2.1 No alias DNA polymerase epsilon catalytic subunit A... 0.02 Archaeplastida
Solyc11g067140.2.1 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.03 Archaeplastida
Zm00001e014636_P002 No alias catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013697 DNA_pol_e_suA_C 1776 1888
IPR013697 DNA_pol_e_suA_C 1563 1759
IPR006133 DNA-dir_DNA_pol_B_exonuc 119 499
No external refs found!