Cre03.g180850

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component

Gene families : OG0001193 (Archaeplastida) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g180850
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00163370	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
AT3G23660	No alias	Sec23/Sec24 protein transport family protein	0.07	Archaeplastida
AT5G43670	No alias	Sec23/Sec24 protein transport family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00001408.15	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
GSVIVT01026719001	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	Archaeplastida
Gb_05558	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
LOC_Os09g28610.1	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
LOC_Os11g24560.1	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
MA_10427000g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c10_18520V3.1	No alias	Sec23/Sec24 protein transport family protein	0.02	Archaeplastida
Smo107900	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	Archaeplastida
Smo168140	No alias	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.04	Archaeplastida
Solyc05g053830.3.1	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
Zm00001e008888_P001	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida
Zm00001e009959_P002	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.03	Archaeplastida
Zm00001e021415_P001	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0005047	signal recognition particle binding	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
CC	GO:0005785	signal recognition particle receptor complex	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008417	fucosyltransferase activity	IEP	Neighborhood
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012990	Sec23_24_beta_S	402	506
IPR006896	Sec23/24_trunk_dom	120	389
IPR006900	Sec23/24_helical_dom	520	617
IPR006895	Znf_Sec23_Sec24	53	91
IPR007123	Gelsolin-like_dom	634	720

External Links

No external refs found!

Cre03.g180850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation