Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP72 component
Gene families : OG0005190 (Archaeplastida) Phylogenetic Tree(s): OG0005190_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre03.g182500 | |
Cluster | HCCA: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G67680 | No alias | SRP72 RNA-binding domain | 0.01 | Archaeplastida | |
Cpa|evm.model.tig00021127.181 | No alias | Protein translocation.endoplasmic... | 0.02 | Archaeplastida | |
GSVIVT01010320001 | No alias | Protein translocation.endoplasmic... | 0.02 | Archaeplastida | |
LOC_Os01g66560.1 | No alias | component SRP72 of SRP (signal recognition particle) complex | 0.04 | Archaeplastida | |
Pp3c19_7700V3.1 | No alias | SRP72 RNA-binding domain | 0.03 | Archaeplastida | |
Zm00001e019008_P003 | No alias | component SRP72 of SRP (signal recognition particle) complex | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEA | Interproscan |
MF | GO:0008312 | 7S RNA binding | IEA | Interproscan |
CC | GO:0048500 | signal recognition particle | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0005047 | signal recognition particle binding | IEP | Neighborhood |
MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006323 | DNA packaging | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
BP | GO:0030261 | chromosome condensation | IEP | Neighborhood |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Neighborhood |
MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
MF | GO:0031369 | translation initiation factor binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0033218 | amide binding | IEP | Neighborhood |
MF | GO:0042277 | peptide binding | IEP | Neighborhood |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0080009 | mRNA methylation | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013699 | Signal_recog_part_SRP72_RNA-bd | 643 | 691 |
No external refs found! |