Cre03.g189000


Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor


Gene families : OG0002451 (Archaeplastida) Phylogenetic Tree(s): OG0002451_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g189000
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00116180 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
Cpa|evm.model.tig00000605.2 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.02 Archaeplastida
GSVIVT01031756001 No alias Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_22242 No alias Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_22245 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.02 Archaeplastida
Pp3c8_17910V3.1 No alias homolog of RAD54 0.01 Archaeplastida
Solyc04g056410.3.1 No alias chromatin remodeling factor (Rad54) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000330 SNF2_N 370 656
IPR001650 Helicase_C 695 806
No external refs found!