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  5. Cre03.g197700

Cre03.g197700


Description : Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica


Gene families : OG0004943 (Archaeplastida) Phylogenetic Tree(s): OG0004943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g197700
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00115800 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT2G31650 ATX1, SDG27 homologue of trithorax 0.02 Archaeplastida
GSVIVT01013555001 No alias Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_27375 No alias class III/Trithorax histone methyltransferase component... 0.01 Archaeplastida
LOC_Os09g04890.1 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c16_18950V3.1 No alias homologue of trithorax 0.01 Archaeplastida
Pp3c5_20190V3.1 No alias homologue of trithorax 0.01 Archaeplastida
Solyc09g098260.3.1 No alias Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e033644_P001 No alias class III/Trithorax histone methyltransferase component... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR003889 FYrich_C 1075 1143
IPR001214 SET_dom 1741 1853
IPR003888 FYrich_N 1019 1068
IPR000313 PWWP_dom 841 893
No external refs found!