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  5. AMTR_s00048p00184670

AMTR_s00048p00184670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.138

Description : Cell cycle.regulation.cyclins.CYCA-type cyclin


Gene families : OG0000635 (Archaeplastida) Phylogenetic Tree(s): OG0000635_tree ,
OG_05_0000438 (LandPlants) Phylogenetic Tree(s): OG_05_0000438_tree ,
OG_06_0000371 (SeedPlants) Phylogenetic Tree(s): OG_06_0000371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00184670
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G44110 CYCA1;1 Cyclin A1;1 0.04 Archaeplastida
GSVIVT01008823001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 Archaeplastida
Gb_03779 No alias cyclin (CYCA) 0.02 Archaeplastida
Gb_07594 No alias cyclin (CYCA) 0.02 Archaeplastida
Gb_10619 No alias cyclin (CYCA) 0.04 Archaeplastida
LOC_Os01g13260.1 No alias cyclin (CYCA) 0.03 Archaeplastida
LOC_Os03g41100.1 No alias cyclin (CYCA) 0.05 Archaeplastida
LOC_Os12g31810.1 No alias cyclin (CYCA) 0.03 Archaeplastida
MA_28323g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
MA_88982g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
Pp3c14_23640V3.1 No alias Cyclin A1;1 0.02 Archaeplastida
Pp3c1_38770V3.1 No alias Cyclin A1;1 0.03 Archaeplastida
Pp3c2_9020V3.1 No alias Cyclin A1;1 0.02 Archaeplastida
Smo442428 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 Archaeplastida
Smo97411 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
Solyc04g078310.3.1 No alias cyclin (CYCA) 0.06 Archaeplastida
Solyc11g005090.2.1 No alias cyclin (CYCA) 0.03 Archaeplastida
Zm00001e017335_P001 No alias cyclin (CYCA) 0.03 Archaeplastida
Zm00001e026125_P002 No alias cyclin (CYCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042181 ketone biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901661 quinone metabolic process IEP Neighborhood
BP GO:1901663 quinone biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 419 534
IPR006671 Cyclin_N 290 417
No external refs found!