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  5. AMTR_s00048p00192820

AMTR_s00048p00192820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.152

No description available


Gene families : OG0001452 (Archaeplastida) Phylogenetic Tree(s): OG0001452_tree ,
OG_05_0005413 (LandPlants) Phylogenetic Tree(s): OG_05_0005413_tree ,
OG_06_0008310 (SeedPlants) Phylogenetic Tree(s): OG_06_0008310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00192820
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT5G17170 ENH1 rubredoxin family protein 0.05 Archaeplastida
AT5G51010 No alias Rubredoxin-like superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00021348.10 No alias No description available 0.01 Archaeplastida
Cre06.g284600 No alias No description available 0.03 Archaeplastida
Cre12.g510400 No alias No description available 0.02 Archaeplastida
Cre24.g755197 No alias No description available 0.03 Archaeplastida
GSVIVT01008662001 No alias No description available 0.07 Archaeplastida
GSVIVT01024454001 No alias No description available 0.04 Archaeplastida
Gb_41477 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g06530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10433619g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_77701g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_82007g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp4g08900.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c10_15730V3.1 No alias rubredoxin family protein 0.04 Archaeplastida
Pp3c20_8260V3.1 No alias Rubredoxin-like superfamily protein 0.04 Archaeplastida
Smo146861 No alias No description available 0.04 Archaeplastida
Solyc03g096850.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc03g118130.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e011158_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e040182_P002 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 198 232
No external refs found!