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  5. Cre03.g207050

Cre03.g207050


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL29 component


Gene families : OG0004913 (Archaeplastida) Phylogenetic Tree(s): OG0004913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g207050
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00034600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
AMTR_s03807p00002720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
AT3G06680 No alias Ribosomal L29e protein family 0.04 Archaeplastida
AT3G06700 No alias Ribosomal L29e protein family 0.04 Archaeplastida
Cpa|evm.model.tig00000269.24 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
GSVIVT01028108001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_37735 No alias component RPL29 of LSU proteome component 0.16 Archaeplastida
LOC_Os01g19840.1 No alias component RPL29 of LSU proteome component 0.05 Archaeplastida
LOC_Os05g28750.1 No alias component RPL29 of LSU proteome component 0.06 Archaeplastida
MA_10433318g0010 No alias component RPL29 of LSU proteome component 0.03 Archaeplastida
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.12 Archaeplastida
Pp3c10_8040V3.1 No alias Ribosomal L29e protein family 0.2 Archaeplastida
Pp3c14_7570V3.1 No alias Ribosomal L29e protein family 0.22 Archaeplastida
Pp3c1_34380V3.1 No alias Ribosomal L29e protein family 0.18 Archaeplastida
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!