1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00048p00206850

AMTR_s00048p00206850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.179

Description : Uncharacterized protein At4g15970 OS=Arabidopsis thaliana


Gene families : OG0000317 (Archaeplastida) Phylogenetic Tree(s): OG0000317_tree ,
OG_05_0000157 (LandPlants) Phylogenetic Tree(s): OG_05_0000157_tree ,
OG_06_0001099 (SeedPlants) Phylogenetic Tree(s): OG_06_0001099_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00206850
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT5G44820 No alias Nucleotide-diphospho-sugar transferase family protein 0.02 Archaeplastida
GSVIVT01010291001 No alias Uncharacterized protein At4g15970 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g69190.1 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g69200.1 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 Archaeplastida
MA_8135787g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g021230.4.1 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e018828_P004 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e028448_P001 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e033311_P001 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 239 436
No external refs found!