1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00048p00214910

AMTR_s00048p00214910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.194

No description available


Gene families : OG0000612 (Archaeplastida) Phylogenetic Tree(s): OG0000612_tree ,
OG_05_0007759 (LandPlants) Phylogenetic Tree(s): OG_05_0007759_tree ,
OG_06_0008552 (SeedPlants) Phylogenetic Tree(s): OG_06_0008552_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00214910
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Gb_08550 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_17402 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_73440g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9590976g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c1_25080V3.1 No alias Family of unknown function (DUF716) 0.02 Archaeplastida
Solyc01g006050.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006904 DUF716_TMEM45 122 254
No external refs found!