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  5. Cre04.g225850

Cre04.g225850


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g225850
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT2G25340 ATVAMP712, VAMP712 vesicle-associated membrane protein 712 0.01 Archaeplastida
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.02 Archaeplastida
Cpa|evm.model.tig00000870.21 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
GSVIVT01000524001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
GSVIVT01035876001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Gb_23049 No alias VAMP7-type R-type SNARE longin protein 0.01 Archaeplastida
Gb_34159 No alias VAMP7-type R-type SNARE longin protein 0.01 Archaeplastida
MA_92947g0030 No alias VAMP7-type R-type SNARE longin protein 0.01 Archaeplastida
Smo164037 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc06g083530.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.06 Archaeplastida
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
Zm00001e009585_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 95
IPR001388 Synaptobrevin 127 212
No external refs found!