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  5. AMTR_s00048p00225010

AMTR_s00048p00225010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.214

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00225010
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01029796001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.02 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_24349 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g20760.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os07g07870.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g30590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Solyc01g005985.1.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc03g005210.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 47 125
No external refs found!