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  5. Cre05.g243000

Cre05.g243000


Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000192 (Archaeplastida) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre05.g243000
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G10760 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000984.19 No alias No description available 0.01 Archaeplastida
GSVIVT01025785001 No alias No description available 0.02 Archaeplastida
Gb_10394 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Gb_15501 No alias B-type cytokinin ARR response activator. transcription... 0.01 Archaeplastida
Gb_37200 No alias B-type cytokinin ARR response activator. transcription... 0.01 Archaeplastida
LOC_Os05g34110.1 No alias Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_83273g0010 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
MA_92689g0020 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Smo36646 No alias Multi-process regulation.circadian clock.evening element... 0.02 Archaeplastida
Solyc01g065540.3.1 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Solyc04g008050.4.1 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Solyc07g005140.4.1 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Zm00001e000887_P002 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Zm00001e016123_P001 No alias B-type cytokinin ARR response activator. transcription... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 29 136
No external refs found!