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  5. AMTR_s00049p00073250

AMTR_s00049p00073250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.46

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein


Gene families : OG0006934 (Archaeplastida) Phylogenetic Tree(s): OG0006934_tree ,
OG_05_0008227 (LandPlants) Phylogenetic Tree(s): OG_05_0008227_tree ,
OG_06_0009958 (SeedPlants) Phylogenetic Tree(s): OG_06_0009958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00073250
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.02 Archaeplastida
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!